Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915945.1_cds_XP_016465661.1_58595
CDS Infomation

[gene=LOC107788501] [db_xref=GeneID:107788501] [protein=DUF21 domain-containing protein At4g14240-like] [protein_id=XP_016465661.1] [location=join(23846..24080,25404..25480,26031..26114,26207..26320,27326..27409,27526..27597,27887..27954,28860..28947,29038..29111,29196..29559,29653..29699,29784..29865,30884..30994)] [gbkey=CDS]
Sequence

ATGCACCTGTTGAATGCATTGGAAATAGCTAGAATGGCAACAAGGGTACCAAATTCATTA
GGGGCAGAAATAGAATTTGGGACAGTAACATGGTTTGTGTATGCAGGGATCTCGTGTTTC
TTGGTACTATTTGCTGGGATTATGTCAGGTTTAACATTGGGTCTTATGTCTTTGGGTCTT
GTTGAACTTGAGATCCTCCAACGTAGTGGCACCCAAGTTGAGAAAAAGCAAGCAGCTACA
ATATTTCCTGTAGTTCAGAAGCAACACCAGCTTCTCGTGACCCTACTTCTATGCAACGCT
GCTTCGATGGAGGCACTACCTATATACCTGGACAAAATTTTCAACCAATATGTGGCCATT
ATACTATCAGTAACTTTTGTTTTGGCATTTGGAGAGGTTATTCCTCAAGCAATATGCACC
AGATATGGACTTGCCGTAGGTGCAAACTTTGTCTGGCTTGTTCGTATTCTGATGATTCTA
TGCTACCCAATTGCTTACCCCATAGGAAAGATCCTGGACTGCGTATTGGGACACAATGAA
GTACTATTCAGACGTGCTCAGCTGAAAGCCCTTGTTTCTATTCACGGTCAAGAGGCTGGC
AAGGGAGGTGAACTTACACATGATGAGACGACAATCATTAGTGGAGCACTAGATTTGACT
GAGAAGACTGCTGAGGAGGCAATGACGCCCATTGAGTCAACATTTTCATTGGATGTCAAT
TCAAAGCTGGACTGGGAAGCAATGGGAAAAGTTCTTGCTAGGGGTCATAGCAGAGTTCCT
GTATACTCTGGCAATCCAAAGAATATTATTGGTCTTCTACTGGTGAAAAGTCTTCTTACT
GTGCGGCCGGAAACAGAGACGCCAGTTAGTTCTGTTTCTATTCGGAGAATTCCACGAGTT
CCTGCTGATATGCCATTGTATGACATACTAAACGAGTTCCAAAAGGGTAGCAGTCATATG
GCTGCAGTAGTGAAGACTAAAGGAAAAAGCAAAAAACATCCTTTGGTCATCGAGGAAGAG
AAATCTCAGGATGGTGCAGTCACTGGCGGAAATTCTCTGTTAACTACTTCTCAAACAAAG
GATAAAAAGCCAGATAGCGTTGTCGTTGATATTGAGAAGGCTAGAGTCCCAGCAGCAGTA
ACCTCGCCAGCATCTGGTGATGCAGTGATGAATGCATTGATTCAGTCATCAGACGATATT
GAGGAAGGTGAAGTAATAGGTATAATCACCTTGGAAGATGTATTTGAAGAACTTTTACAG
GAGGAAATAGTGGACGAGACTGATGAGTATGTCGATGTACATAGAAGGATACGTGTGGCT
GCTGCAGCAGCTGCTTCATCAGTGGCACGAGCTCCATCGGTTCGTAGATTAACAGCCCAA
AAGGCAGCTGGAGGCCAAAGTAAGGAAGGCCAGAGCCCCAAAAAGTCCACTGAGGACCTT
TCTACCTCAAAAAGAACACAAGGGAGTCTCAGAGAACCTCTTCTTGATAACAAGAGATAA

Peptide Sequence

PEP ID

XP_016465661.1
PEP Infomation

PREDICTED: DUF21 domain-containing protein At4g14240-like [Nicotiana tabacum]
Sequence

MHLLNALEIARMATRVPNSLGAEIEFGTVTWFVYAGISCFLVLFAGIMSGLTLGLMSLGL
VELEILQRSGTQVEKKQAATIFPVVQKQHQLLVTLLLCNAASMEALPIYLDKIFNQYVAI
ILSVTFVLAFGEVIPQAICTRYGLAVGANFVWLVRILMILCYPIAYPIGKILDCVLGHNE
VLFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVN
SKLDWEAMGKVLARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSSVSIRRIPRV
PADMPLYDILNEFQKGSSHMAAVVKTKGKSKKHPLVIEEEKSQDGAVTGGNSLLTTSQTK
DKKPDSVVVDIEKARVPAAVTSPASGDAVMNALIQSSDDIEEGEVIGIITLEDVFEELLQ
EEIVDETDEYVDVHRRIRVAAAAAASSVARAPSVRRLTAQKAAGGQSKEGQSPKKSTEDL
STSKRTQGSLREPLLDNKR

Transcript Sequence

Gene sequence data has not been registered.